CDS
Accession Number | TCMCG029C24030 |
gbkey | CDS |
Protein Id | XP_023771470.1 |
Location | join(333574..333654,334118..335224,335970..337027,337115..337255,337770..338013,338101..338811,339501..339686,339774..340471,340721..340772,340856..341486,341559..341767,341923..342199,342202..342430,342522..342626,342919..342985,343067..343144,343266..343334,343418..343492) |
Gene | LOC111920123 |
GeneID | 111920123 |
Organism | Lactuca sativa |
Protein
Length | 2006aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA432228 |
db_source | XM_023915702.1 |
Definition | LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PRT6-like [Lactuca sativa] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGTTCAGGATGGAGATTGATTCATCATCATCATCCGAACCCAACACGCCTCCGCTTTCTCCAAAAGATCATATACTCAAGAGGCTTGTCCTGATTGGAGTTCCTGAAGACAGACTCGATCATCAGGAGTCTGGCTTAGTTTCATATGTTAAAGAAAACAAACATCGAATACCAGATATCGTCTCTGCACTTTTACCAACTGATGTTGAAATGGAAACTGCCATGGAAGTCCAGTCAGAACCTCCTGCTAGATCAAAGATTGAAGATTTACTACATGAAAGTATGATCTGGTTACAGTGGTTGATGTTTGATGGTGATCCTAGTGAAGTCCTGCAACGCCTGGCAATCATGAATATCGGTCAACGTGGTGTTTGTGGGGCTGTTTGGGGTCACAATGATATAGCATATCGCTGTAGAACATGCGAACATGATCCCACTTGTGCAATTTGTGTCCCATGTTTCCAAAATGGTAACCACAAAGACCATGATTACTCCATCATATATACAGGTGGTGGATGCTGTGATTGTGGGGATGTGACTGCATGGAAACGTAGTGGCTTTTGTTCTAAACATAAAGGAGCTGAACAGATACAGCCACTTCAACAAGATGTTGCAAATACTTTATCTCCTGTTCTTGATTCCCTTCTCGTTTTCTGGAAGAACAAACTGCTATTTGCAGAGAGCATTCATCAAGATCGCGATCGACCCACTCTTGATGATAATGTTGCAGAACAGAAAAAGGTTGCAGATGAGCTGACATCAGCGGTGGTAGGGATGCTTTTGGAATTTTGCAAGTGTAGTGAAAGTTTACTCAGTTTTGTTTCTGGAAGGGTATGCTCTTTGGTTGGTTTGTTGGATGTTCTTGTAATGGCAGAGAGGTTTTTAAGCACTGAAGTTGTCCGGAAGCTTCAGGAGTTACTGTTGAAATTACTAAGTGATCCTTTCTTCAAGTATGAGTTTGCAAAGGCTTTTTTACGGTATTACCCTACAGTTGTGAATGAAGCTGTAAAAGAGTGTAAAGATTCTATTTTTAGAAAGTATCCACTGCTGCCGACATTTTCTGTTCAAATCTTCACTGTTCCTACTTTGACACCACGCCTTGTTAAGGAGATGGATCTTTTGGCAATGCTGTTGGATTGTTTGACCAATATATTCAGTTCTTGTTCTAGAGAGGATCATCGACTACAGGTTTCCAAATGGGGAAACTTATATGAAACAACTCATCGTGTGGTTGAAGACATTCGATTTGTCATGAGCCATTCAACAATTCCCAAATACATGACATGTGACAGGCGTGATATCTCAAGAACATGGATGAAACTTTTAGCTTTTGTCCAAGGCATGAGCCCTCAAAAAAGAGAAACAAATATTCACATAGAAGAAGAAAACGAAAACATGCATTTACCTTTCGTTTTAGGTCATTCAATTGCAAATATTCATGCTCTGTTAGTGGCTGGAGCATTTTCCAACAAAGAAACAGAAGATGAATCAGTTATTGATGAACAAGATAGTTTAAGACATGCAAAAGTGGGAAGACTTTCACAAGAAAGCTCTGTTTCTAGTGTGACTGGGAGTGGAAGGGGTAGTGATAGTTTCACAGTGTTGACTTCAATTTCATGGTTGACTTTTGAGTGTTTAAGAGCGATTGAAAACTGGTTGAAAGTGGACAATACATCAGGAGATCTTAATTCGAGAGGAACCAATGCTTCTGGTAGTAATTTCTTTCAGTTAAAGAGAACACTTTCTAAGTTTAGAAAGGGAAAAACTATCTTCAAGTCACCTTCAAGTAAAACTATGGGTGGTGGTGTTCATCAACGTTTGACCGGGTCAAATGAGACCATTTCTGCAGGTTTAATCGATCATCAAATGGAAGGAGATTATACAAACGAATTGGAATCACTTAGTGTTCTAAGTTTATCAGATTGGCCAGAAATTGAATATGATGTTAGTTCACAGGAGATATCAGTACACATTCCATTACACCGATTGCTGTCATTGGTTTTACAAAGAGCATTAAAAAGATGTTATGGTGAATCTGAATCTGAATCTGAATCTGGATTGCCAGCTGTATATGGTGATTTCTTTGGTCATGTTTTAGGTGGTTGCCACCCGTATGGATTCTCAGCTTTTGTAATGGAACATCCTTTGCGAATTAGGGTTTTCTGTAGTGAAGTTCATGCTGGAATGTGGAGAAAAAACGGGGATGCTGCAATATTATCTTATGAGTGGTATCGTTCTGTTCGATGGTCTGAACAGGGTTTAGAACTTGATCTATTTCTTCTACAGTGTTGTGCTGCATTAGCCCCTGCAGATCTTTATATTGCTAGAATCATCGAACGTTTTGGTCTTTCAAGTTATCTTTCCTTAAATTTGGAAAGAGCTAGTGAGTATGAAGCGGTTTTGGTACAAGAAATGCTAAATCTTATTATACAGATAGTAAAAGAAAGGCGATTTTGTGGATTAACTACAGCTCAATGTCTACAACGTGAGTTAATCTATAAGCTATCAACCGGAAATGCTACTCATAGTCAACTGGTCAAATCCCTTCCTCGTGACCTTTCCAAAGTAGAACAATTTCAACAAATTTTAGACACTGTAGCCGAGTATTCATATCCATCTGGAATCAAACAGGGTATGTACAAATTACGGTTGGAATACTGGAAAGAGTTGGATTTGTATCATCCTCGTTGGAACTCACGAGACTTGCAAGTTGCAGAAGAAAGATACTTGCGTTTTTGTAGTGTTTCTGCATTGATGAATCAGCTCCCAAAATGGACAAAAATCTATCCTCCTCTTAATGGGTTAGCTAAAGTAGCCACATGTAAAATAGTTCTTCAAATCATCCGATCTGTTCTTTTCTACGCGCTTTTTACAGATAAATTAATCGCATCGCGTGCGCCAGATGGCGTTCTTATAACAGCATTGCACTTGTTGTCACTAGCTTTGGACATTTCTCAAGCACAGATCGAGTCACAATCTGGTGGTTTTGATAATTCTATTCCCCTTTTAGTCTTTGCTGCTGAAGAAATATCTACAGGGTTGAATGATGGATATGATGATCAAAGCTTGCTGTCGCTTCTTGTGTCGCTAATGAGGATAAATAAGAAGGAAAATGCTTATAACTATGTGGAGTCTGGTGGGTTTGACCTTTCTTCTTTGATTAAGAATCTTCTTCAGAAGTTTGCTGAGCTGGATGCTGGATGTTTAACAAAACTGCAAATGTTGGCGCCTGAAGTTGTTAATCAGTTATCTTATTCTGGTGATGTGAGTAACAACAGTGCACCTGTTTCTGATAGTGAAAAAAGAAAGGCAAAAGCACGTGAGAGACAAGCTGCTATAATGGAAAAGATGAAGGCTCAGCAGTCAAAGTTCATGGAGAATATGACAGAAGACACTGGCTTAGATGACACAAATGACCCTGAAGAAAGTCTTCCTGATGTCACAAATGATTCAGATGTACAAGTTGTCTGCTCTCTTTGTCATGATGCAAATTCCAAGATTCCTGTCTCTTTTCTAATTCTACTCCAGAAATCCAGGCTTGTGAGTTTACTTGACAAAGGTCCCCCATCATGGGAAAAAGAAGCTCAAAGATCTGGAAAGGAACAAGTCAATGAGGACACATTGACTGTTAAATCATCTGAAACAGTAAATTCCCAGTTAATGGAAGTCATTCAGACTGCAATTAATGAATTTGCATCCACTGGTCAACCAAGAGAGGTTGATGCTTTTCTGGAGTTTATAAAAACCCGATTCCCTTCTCTCAACAATATAAATATTCCTCCTCAAACAGCACATGATAGTAGTCAAAGTCAACAAACCACAGCTTCAGCTTCGGGTGATGCATTTGAAGAAGATATGTACACACTCATTCTGGATGTTATGGAAAATAATGTGGGGGAATCAGACGTTTTGATTGATGAGGTGGATTTTTCGATTCCTGGAAGTAGTTCATACAGTAGTTATGATACAAATGAATCTCTTTTGCTTGGAAAGTACATTGCCTCTCTCTCTCATGAAGTTGTAAATAATCCATCATCATCATCATCATCTTCATCAGAAAACGTGGGGTCCCCTAATGGTAAGCCACAGATAGGTGCTTCAGTTACTTCACGGTTGCCATATGATGGATTTGGGCCTTCGGATTGTAATGGCATTTATGTTACTTCTTGTGGCCATGCTGTCCATCAAGGTTGCCTTGATCGTTATCTACGCTCCCTGAAGGAAAGATACACAAGAAGGATTGATTTTGAAGGAGGACATATTGTGGATCCGGATCAGGGGGAGTTTTTATGTCCTGTTTGTCGGGGCCTTGCAAATTCTGTCCTACCTGATTTGCCTAGAGAAGGAACGATAATGAAGGAGAGTGTAGCATCCAAAATTCCAAATCTGTCCCCCATGGATGCTGCTAACTACGAATCATCTGAACATCTTCTTCTTCTTAAACAATCCCTCTCTCTTTTACAAGCTTCTGCAGATGTTTCTAGAAGGAACGAGTTCCTCAAATCTTTTCCAGTAAAACACAAAGGAGGAACAGGGGCGAATCTTGAATCTGTGGTTCATTTACTACATGAAATGTATTTTCCAGGAAATGATAAAATCTCAGGATCAAGTCGATTGAGCGACTCCATGATCATGTGGGACACACTCAAGTATTCCCTTGTGTCTACAGAAATTGCTGCTAGATCTGAAAAAACTTCACATGCCACCAATTATAGCGTTAGTTCATTGTATGAGGAATTAAGATCTTCCAGTGGCTTCATTTTGTCATTGTTGCTGAAAATTGTCCACAGCATCCGTTCCCAAAATTCTCTTGATGTTCTTTTAAGATTAAGGTGTATTCAACAGTTTGCAAAGTCTATACATGCTGATACTCTCAATGAACTACCTGGTCATACAAACAGAGTTGAAGAAAATATGATGAGCATATTGGAAAATGCTGACATGGGCATACGATTCCCTGATGTACAGTTTTGGACCATGGCATCCAATCCTGTCCTTGCATCTGATCCCTTTTCAACTTTAATGTGGATCCTCTTCTGTCTTCCAGTCCCATTTATGTCCTCTGAGAAATCATTCTTGCCTCTTGTTCATATGTGCTATGTTGTCTCCATTACTCAGGCTGTAATAACATATTTTGGGAAAAACGAATCTGCTATGGATGATTTCAGTTACCATGAATCTCTCATCACAGACATATACAAATTCATGGGTGAACACGTGTTGATACGTCAATATTTTGTTTCCAATTATATTGATAGTTCTCGTGATATTAAGGAGACAATTCGTAGCTTGAGCTTTCCATTCTTAAGAAGGTGTGCACTGTTATGGAAATTAATGAACTCTTCAAGTTTAGCACCGTTTAGTGGGGCCCATAGATCATCACAATCATTTGAAGATTTTGCTTATGGTTTTGCTGAAGAGTTTGTTGAAATTGAAGAGTTGGAGAAGATGTTCAAGATTCCAACATTAGAGAACATTGTTAATGATGAGGTGTCACGTTCTCTGGTTTTAAAATGGTTGAATCATTTTGCTAGAGAATTTGAAGTAGGGGTTTTGTACAAAACCCCTGTTGTCCCATTTAAGTTGATGGTTTTGCCTTACCTCTACCAAGATCTCTTACAAAGGTACATAAAACAGAAGTGTGTTGACTGTGGAGCAGTTCAAGATGAACCTGCATTATGCTTGTTGTGTGGTAAATTGTGCTCACCAAGCTGGAAGACATGCTGCAGGAATAACAAGTGCCAAACTCATGCAATGTCTTGTGGTGCTGGTACTGGTGTGTTTCTTTTAATCAGGAAAACCACAATATTACTTCAAAGATCTGCACGTCAGGCACGTTGGCCATCTCCATACTTGGATGCATTTGGTGAAGAGGATGTTGAAATGCATAGGGGAAAGCCATTGTATCTGAACGAGGAACGCTATGCAGCATTGAGTCATATGGTGGCTTCTCATGGACTTGATCGTAGTTCAAAAGTGTTGCATCAGACATCAATTGGAGCTTTTCTAATGCTATAG |
Protein: MFRMEIDSSSSSEPNTPPLSPKDHILKRLVLIGVPEDRLDHQESGLVSYVKENKHRIPDIVSALLPTDVEMETAMEVQSEPPARSKIEDLLHESMIWLQWLMFDGDPSEVLQRLAIMNIGQRGVCGAVWGHNDIAYRCRTCEHDPTCAICVPCFQNGNHKDHDYSIIYTGGGCCDCGDVTAWKRSGFCSKHKGAEQIQPLQQDVANTLSPVLDSLLVFWKNKLLFAESIHQDRDRPTLDDNVAEQKKVADELTSAVVGMLLEFCKCSESLLSFVSGRVCSLVGLLDVLVMAERFLSTEVVRKLQELLLKLLSDPFFKYEFAKAFLRYYPTVVNEAVKECKDSIFRKYPLLPTFSVQIFTVPTLTPRLVKEMDLLAMLLDCLTNIFSSCSREDHRLQVSKWGNLYETTHRVVEDIRFVMSHSTIPKYMTCDRRDISRTWMKLLAFVQGMSPQKRETNIHIEEENENMHLPFVLGHSIANIHALLVAGAFSNKETEDESVIDEQDSLRHAKVGRLSQESSVSSVTGSGRGSDSFTVLTSISWLTFECLRAIENWLKVDNTSGDLNSRGTNASGSNFFQLKRTLSKFRKGKTIFKSPSSKTMGGGVHQRLTGSNETISAGLIDHQMEGDYTNELESLSVLSLSDWPEIEYDVSSQEISVHIPLHRLLSLVLQRALKRCYGESESESESGLPAVYGDFFGHVLGGCHPYGFSAFVMEHPLRIRVFCSEVHAGMWRKNGDAAILSYEWYRSVRWSEQGLELDLFLLQCCAALAPADLYIARIIERFGLSSYLSLNLERASEYEAVLVQEMLNLIIQIVKERRFCGLTTAQCLQRELIYKLSTGNATHSQLVKSLPRDLSKVEQFQQILDTVAEYSYPSGIKQGMYKLRLEYWKELDLYHPRWNSRDLQVAEERYLRFCSVSALMNQLPKWTKIYPPLNGLAKVATCKIVLQIIRSVLFYALFTDKLIASRAPDGVLITALHLLSLALDISQAQIESQSGGFDNSIPLLVFAAEEISTGLNDGYDDQSLLSLLVSLMRINKKENAYNYVESGGFDLSSLIKNLLQKFAELDAGCLTKLQMLAPEVVNQLSYSGDVSNNSAPVSDSEKRKAKARERQAAIMEKMKAQQSKFMENMTEDTGLDDTNDPEESLPDVTNDSDVQVVCSLCHDANSKIPVSFLILLQKSRLVSLLDKGPPSWEKEAQRSGKEQVNEDTLTVKSSETVNSQLMEVIQTAINEFASTGQPREVDAFLEFIKTRFPSLNNINIPPQTAHDSSQSQQTTASASGDAFEEDMYTLILDVMENNVGESDVLIDEVDFSIPGSSSYSSYDTNESLLLGKYIASLSHEVVNNPSSSSSSSSENVGSPNGKPQIGASVTSRLPYDGFGPSDCNGIYVTSCGHAVHQGCLDRYLRSLKERYTRRIDFEGGHIVDPDQGEFLCPVCRGLANSVLPDLPREGTIMKESVASKIPNLSPMDAANYESSEHLLLLKQSLSLLQASADVSRRNEFLKSFPVKHKGGTGANLESVVHLLHEMYFPGNDKISGSSRLSDSMIMWDTLKYSLVSTEIAARSEKTSHATNYSVSSLYEELRSSSGFILSLLLKIVHSIRSQNSLDVLLRLRCIQQFAKSIHADTLNELPGHTNRVEENMMSILENADMGIRFPDVQFWTMASNPVLASDPFSTLMWILFCLPVPFMSSEKSFLPLVHMCYVVSITQAVITYFGKNESAMDDFSYHESLITDIYKFMGEHVLIRQYFVSNYIDSSRDIKETIRSLSFPFLRRCALLWKLMNSSSLAPFSGAHRSSQSFEDXFAYGFAEEFVEIEELEKMFKIPTLENIVNDEVSRSLVLKWLNHFAREFEVGVLYKTPVVPFKLMVLPYLYQDLLQRYIKQKCVDCGAVQDEPALCLLCGKLCSPSWKTCCRNNKCQTHAMSCGAGTGVFLLIRKTTILLQRSARQARWPSPYLDAFGEEDVEMHRGKPLYLNEERYAALSHMVASHGLDRSSKVLHQTSIGAFLML |